NAGA_(gene) Knowpia

NAGA
Available structures
PDB	Ortholog search: PDBe RCSB
List of PDB id codes
	4DO5, 3H53, 3IGU, 4DO4, 4DO6, 3H54, 3H55
Identifiers
Aliases	NAGA, D22S674, GALB, alpha-N-acetylgalactosaminidase
External IDs	OMIM: 104170 MGI: 1261422 HomoloGene: 221 GeneCards: NAGA
Gene location (Human)
Chr.	Chromosome 22 (human)
End	42,070,842 bp
Gene location (Mouse)
Chr.	Chromosome 15 (mouse)
End	82,223,126 bp
RNA expression pattern
	Top expressed in
	monocyte; ; stromal cell of endometrium; ; gallbladder; ; rectum; ; placenta; ; appendix; ; right coronary artery; ; blood; ; smooth muscle tissue; ; ascending aorta;
	Top expressed in
	islet of Langerhans; ; yolk sac; ; stomach; ; epithelium of stomach; ; lacrimal gland; ; small intestine; ; pyloric antrum; ; colon; ; parotid gland; ; duodenum;
	More reference expression data
	; ;
	More reference expression data
Gene ontology
Molecular function	hydrolase activity, hydrolyzing O-glycosyl compounds; alpha-N-acetylgalactosaminidase activity; hydrolase activity; protein homodimerization activity; alpha-galactosidase activity; catalytic activity; hydrolase activity, acting on glycosyl bonds;
Cellular component	cytoplasm; lysosome; extracellular exosome;
Biological process	carbohydrate catabolic process; metabolism; glycoside catabolic process; glycolipid catabolic process; oligosaccharide metabolic process; glycosylceramide catabolic process; carbohydrate metabolic process;
	Sources:Amigo / QuickGO
Orthologs
	4668
	17939
	ENSG00000198951
	ENSMUSG00000022453
	P17050
	Q9QWR8
	NM_000262; NM_001362848; NM_001362850
	NM_008669; NM_001355546
	NP_000253; NP_001349777; NP_001349779; NP_000253.1
	NP_032695; NP_001342475
	Wikidata
View/Edit Human	View/Edit Mouse

Alpha-N-acetylgalactosaminidase is an enzyme that in humans is encoded by the NAGA gene.^[5]

NAGA encodes the lysosomal enzyme alpha-N-acetylgalactosaminidase, which cleaves alpha-N-acetylgalactosaminyl moieties from glycoconjugates. Mutations in NAGA have been identified as the cause of Schindler disease types I and II (type II also known as Kanzaki disease).^[5]

References edit

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000198951 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000022453 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ ^a ^b "Entrez Gene: NAGA N-acetylgalactosaminidase, alpha-".

Further reading edit

Cantz M, Ulrich-Bott B (1990). "Disorders of glycoprotein degradation". J. Inherit. Metab. Dis. 13 (4): 523–37. doi:10.1007/BF01799510. PMID 2122119. S2CID 21567863.
Wang AM, Desnick RJ (1991). "Structural organization and complete sequence of the human alpha-N-acetylgalactosaminidase gene: homology with the alpha-galactosidase A gene provides evidence for evolution from a common ancestral gene". Genomics. 10 (1): 133–42. doi:10.1016/0888-7543(91)90493-X. PMID 1646157.
Wang AM, Bishop DF, Desnick RJ (1991). "Human alpha-N-acetylgalactosaminidase-molecular cloning, nucleotide sequence, and expression of a full-length cDNA. Homology with human alpha-galactosidase A suggests evolution from a common ancestral gene". J. Biol. Chem. 265 (35): 21859–66. doi:10.1016/S0021-9258(18)45818-8. PMID 2174888.
Wang AM, Schindler D, Desnick R (1990). "Schindler disease: the molecular lesion in the alpha-N-acetylgalactosaminidase gene that causes an infantile neuroaxonal dystrophy". J. Clin. Invest. 86 (5): 1752–6. doi:10.1172/JCI114901. PMC 296929. PMID 2243144.
Warner TG, Louie A, Potier M (1991). "Photolabeling of the alpha-neuraminidase/beta-galactosidase complex from human placenta with a photoreactive neuraminidase inhibitor". Biochem. Biophys. Res. Commun. 173 (1): 13–9. doi:10.1016/S0006-291X(05)81014-9. PMID 2256909.
Yamauchi T, Hiraiwa M, Kobayashi H, et al. (1990). "Molecular cloning of two species of cDNAs for human alpha-N-acetylgalactosaminidase and expression in mammalian cells". Biochem. Biophys. Res. Commun. 170 (1): 231–7. doi:10.1016/0006-291X(90)91264-S. PMID 2372288.
Tsuji S, Yamauchi T, Hiraiwa M, et al. (1989). "Molecular cloning of a full-length cDNA for human alpha-N-acetylgalactosaminidase (alpha-galactosidase B)". Biochem. Biophys. Res. Commun. 163 (3): 1498–504. doi:10.1016/0006-291X(89)91149-2. PMID 2551294.
Chabás A, Coll MJ, Aparicio M, Rodriguez Diaz E (1995). "Mild phenotypic expression of alpha-N-acetylgalactosaminidase deficiency in two adult siblings". J. Inherit. Metab. Dis. 17 (6): 724–31. doi:10.1007/BF00712015. PMID 7707696. S2CID 28205039.
Wang AM, Kanzaki T, Desnick RJ (1994). "The molecular lesion in the alpha-N-acetylgalactosaminidase gene that causes angiokeratoma corporis diffusum with glycopeptiduria". J. Clin. Invest. 94 (2): 839–45. doi:10.1172/JCI117404. PMC 296165. PMID 8040340.
de Jong J, van den Berg C, Wijburg H, et al. (1994). "alpha-N-acetylgalactosaminidase deficiency with mild clinical manifestations and difficult biochemical diagnosis". J. Pediatr. 125 (3): 385–91. doi:10.1016/S0022-3476(05)83281-0. PMID 8071745.
Keulemans JL, Reuser AJ, Kroos MA, et al. (1996). "Human alpha-N-acetylgalactosaminidase (alpha-NAGA) deficiency: new mutations and the paradox between genotype and phenotype". J. Med. Genet. 33 (6): 458–64. doi:10.1136/jmg.33.6.458. PMC 1050630. PMID 8782044.
Den Tandt WR, Scharpé S (1997). "Micromethod for the fluorimetric determination of plasma N-acetyl-alpha-D-galactosaminidase and study of some of its characteristics". Enzyme Protein. 49 (5–6): 273–80. doi:10.1159/000468637. PMID 9252785.
Gaudet R, Savage JR, McLaughlin JN, et al. (1999). "A molecular mechanism for the phosphorylation-dependent regulation of heterotrimeric G proteins by phosducin". Mol. Cell. 3 (5): 649–60. doi:10.1016/S1097-2765(00)80358-5. PMID 10360181.
Dunham I, Shimizu N, Roe BA, et al. (1999). "The DNA sequence of human chromosome 22". Nature. 402 (6761): 489–95. Bibcode:1999Natur.402..489D. doi:10.1038/990031. PMID 10591208.
Ohta M, Ohnishi T, Ioannou YA, et al. (2000). "Human alpha-N-acetylgalactosaminidase: site occupancy and structure of N-linked oligosaccharides". Glycobiology. 10 (3): 251–61. doi:10.1093/glycob/10.3.251. PMID 10704524.
Kodama K, Kobayashi H, Abe R, et al. (2001). "A new case of alpha-N-acetylgalactosaminidase deficiency with angiokeratoma corporis diffusum, with Ménière's syndrome and without mental retardation". Br. J. Dermatol. 144 (2): 363–8. doi:10.1046/j.1365-2133.2001.04028.x. PMID 11251574. S2CID 23355968.
Mohamad SB, Nagasawa H, Uto Y, Hori H (2003). "Tumor cell alpha-N-acetylgalactosaminidase activity and its involvement in GcMAF-related macrophage activation". Comp. Biochem. Physiol. A. 132 (1): 1–8. doi:10.1016/S1095-6433(01)00522-0. PMID 12062184.
Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. Bibcode:2002PNAS...9916899M. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
Collins JE, Wright CL, Edwards CA, et al. (2005). "A genome annotation-driven approach to cloning the human ORFeome". Genome Biol. 5 (10): R84. doi:10.1186/gb-2004-5-10-r84. PMC 545604. PMID 15461802.