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Thermoplasmata

Summary

In taxonomy, the Thermoplasmata are a class of the Euryarchaeota.[1]

Thermoplasmata
Cuniculiplasma divulgatum
Scientific classification
Domain:
Archaea
Kingdom:
Euryarchaeota
Phylum:
Euryarchaeota
Class:
Thermoplasmata

Reysenbach 2002
Order
Synonyms
  • Picrophilea Cavalier-Smith 2002
  • "Thermoplasmatia" Oren, Parte & Garrity 2016
  • "Thermoplasmia" Cavalier-Smith 2020

All are acidophiles, growing optimally at pH below 2. Picrophilus is currently the most acidophilic of all known organisms growing at a minimum pH of 0.06. Many of these organisms do not contain a cell wall, although this is not true in the case of Picrophilus. Most members of Thermoplasmata are thermophilic.

Phylogeny edit

The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[2] and National Center for Biotechnology Information (NCBI).[1]

16S rRNA based LTP_06_2022[3][4][5] 53 marker proteins based GTDB 08-RS214[6][7][8]
"Natronoplasmatales"

"Natronoplasmataceae" (PWKY01)

"Proteinoplasmatales" (SG8-5)

"Gimiplasmatales"

"Gimiplasmataceae" (UA10834)

"Sysuiplasmatales"

"Sysuiplasmataceae"

Methanomassiliicoccales

Methanomassiliicoccaceae

"Methanomethylophilaceae"

"Aciduliprofundales"

"Aciduliprofundaceae"

Thermoplasmatales

Thermoplasmataceae

See also edit

References edit

  1. ^ a b Sayers; et al. "Thermoplasmata". National Center for Biotechnology Information (NCBI) taxonomy database. Retrieved 2015-08-20.
  2. ^ J.P. Euzéby. "Thermoplasmata". List of Prokaryotic names with Standing in Nomenclature (LPSN). Retrieved 2015-08-20.
  3. ^ "The LTP". Retrieved 10 May 2023.
  4. ^ "LTP_all tree in newick format". Retrieved 10 May 2023.
  5. ^ "LTP_06_2022 Release Notes" (PDF). Retrieved 10 May 2023.
  6. ^ "GTDB release 08-RS214". Genome Taxonomy Database. Retrieved 10 May 2023.
  7. ^ "ar53_r214.sp_label". Genome Taxonomy Database. Retrieved 10 May 2023.
  8. ^ "Taxon History". Genome Taxonomy Database. Retrieved 10 May 2023.

Further reading edit

Scientific journals edit

  • Li, Chao Lun; Jiang, Yun Tao; Liu, Da Li; Qian, JieLei; Liang, Jing Ping; Shu, Rong (August 2014). "Prevalence and quantification of the uncommon Archaea phylotype Thermoplasmata in chronic periodontitis". Archives of Oral Biology. 59 (8): 822–828. doi:10.1016/j.archoralbio.2014.05.011. PMID 24859768.
  • Poulsen, Morten; Schwab, Clarissa; Jensen, Bent Borg; Engberg, Ricarda M.; Spang, Anja; Canibe, Nuria; Hojberg, Ole (June 2013). "Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen". Nature Communications. 4 (1428): 1947. Bibcode:2013NatCo...4.1947P. doi:10.1038/ncomms2847.
  • Cavalier-Smith, T (2002). "The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification". Int. J. Syst. Evol. Microbiol. 52 (Pt 1): 7–76. doi:10.1099/00207713-52-1-7. PMID 11837318.
  • Woese, CR; Kandler O; Wheelis ML (1990). "Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya". Proc. Natl. Acad. Sci. USA. 87 (12): 4576–4579. Bibcode:1990PNAS...87.4576W. doi:10.1073/pnas.87.12.4576. PMC 54159. PMID 2112744.

Scientific books edit

  • Reysenbach, AL (2001). "Class IV. Thermoplasmata class. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.
  • Garrity GM; Holt JG (2001). "Phylum AII. Euryarchaeota phy. nov.". In DR Boone; RW Castenholz (eds.). Bergey's Manual of Systematic Bacteriology Volume 1: The Archaea and the deeply branching and phototrophic Bacteria (2nd ed.). New York: Springer Verlag. p. 169. ISBN 978-0-387-98771-2.