SSBP3 Knowpia

SSBP3
Identifiers
Aliases	SSBP3, CSDP, SSDP, SSDP1, single stranded DNA binding protein 3
External IDs	OMIM: 607390 MGI: 1919725 HomoloGene: 23411 GeneCards: SSBP3
Gene location (Human)
Chr.	Chromosome 1 (human)
End	54,413,479 bp
Gene location (Mouse)
Chr.	Chromosome 4 (mouse)
End	106,906,891 bp
RNA expression pattern
	Top expressed in
	popliteal artery; ; prefrontal cortex; ; canal of the cervix; ; right coronary artery; ; cerebellar hemisphere; ; dorsolateral prefrontal cortex; ; body of stomach; ; ganglionic eminence; ; Brodmann area 9; ; left coronary artery;
	Top expressed in
	superior frontal gyrus; ; cerebellar cortex; ; ganglionic eminence; ; ascending aorta; ; hand; ; maxillary prominence; ; thymus; ; aortic valve; ; primary motor cortex; ; medullary collecting duct;
	More reference expression data
	More reference expression data
Gene ontology
Molecular function	single-stranded DNA binding; DNA binding; protein binding; RNA polymerase II cis-regulatory region sequence-specific DNA binding; DNA-binding transcription activator activity, RNA polymerase II-specific;
Cellular component	nucleus; protein-containing complex;
Biological process	midbrain-hindbrain boundary initiation; positive regulation of transcription, DNA-templated; prechordal plate formation; head morphogenesis; positive regulation of anterior head development; regulation of transcription, DNA-templated; hematopoietic progenitor cell differentiation; transcription, DNA-templated; positive regulation of cell population proliferation; transcription by RNA polymerase II; positive regulation of transcription by RNA polymerase II; head development; protein-containing complex assembly;
	Sources:Amigo / QuickGO
Orthologs
	23648
	72475
	ENSG00000157216
	ENSMUSG00000061887
	Q9BWW4
	Q9D032
	NM_001009955; NM_018070; NM_145716
	NM_023672; NM_198438; NM_001355532
	NP_001009955; NP_060540; NP_663768
	NP_076161; NP_940840; NP_001342461
	Wikidata
View/Edit Human	View/Edit Mouse

Single-stranded DNA-binding protein 3 is a protein that in humans is encoded by the SSBP3 gene.^[5]^[6]

References edit

^ ^a ^b ^c GRCh38: Ensembl release 89: ENSG00000157216 – Ensembl, May 2017
^ ^a ^b ^c GRCm38: Ensembl release 89: ENSMUSG00000061887 – Ensembl, May 2017
^ "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
^ Castro P, Liang H, Liang JC, Nagarajan L (July 2002). "A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity". Genomics. 80 (1): 78–85. doi:10.1006/geno.2002.6805. PMID 12079286.
^ "Entrez Gene: SSBP3 single stranded DNA binding protein 3".

Further reading edit

Wu L (January 2006). "Structure and functional characterization of single-strand DNA binding protein SSDP1: carboxyl-terminal of SSDP1 has transcription activity". Biochemical and Biophysical Research Communications. 339 (3): 977–84. doi:10.1016/j.bbrc.2005.11.098. PMID 16325762.
Chen L, Segal D, Hukriede NA, Podtelejnikov AV, Bayarsaihan D, Kennison JA, Ogryzko VV, Dawid IB, Westphal H (October 2002). "Ssdp proteins interact with the LIM-domain-binding protein Ldb1 to regulate development". Proceedings of the National Academy of Sciences of the United States of America. 99 (22): 14320–5. Bibcode:2002PNAS...9914320C. doi:10.1073/pnas.212532399. PMC 137882. PMID 12381786.
Raval-Fernandes S, Kickhoefer VA, Rome LH (September 1999). "Cloning of a cDNA encoding a sequence-specific single-stranded-DNA-binding protein from Rattus norvegicus". Gene. 237 (1): 201–7. doi:10.1016/S0378-1119(99)00289-9. PMID 10524251.
Adams MD, Kerlavage AR, Fleischmann RD, Fuldner RA, Bult CJ, Lee NH, Kirkness EF, Weinstock KG, Gocayne JD, White O (September 1995). "Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence". Nature. 377 (6547 Suppl): 3–174. PMID 7566098.

[refGRCh38Ensembl-1] GRCh38: Ensembl release 89: ENSG00000157216 – Ensembl, May 2017

[refGRCm38Ensembl-2] GRCm38: Ensembl release 89: ENSMUSG00000061887 – Ensembl, May 2017

[3] "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[4] "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.

[pmid12079286-5] Castro P, Liang H, Liang JC, Nagarajan L (July 2002). "A novel, evolutionarily conserved gene family with putative sequence-specific single-stranded DNA-binding activity". Genomics. 80 (1): 78–85. doi:10.1006/geno.2002.6805. PMID 12079286.

[entrez-6] "Entrez Gene: SSBP3 single stranded DNA binding protein 3".

[5]

[6]

[1]

[2]

[3]

[4]

Summary

References edit

Further reading edit